Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 FP325331.1-202ENST00000623531 1380 ntBASIC20.39■□□□□ 0.85
TRIM2Q9C040 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM2Q9C040 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM2Q9C040 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM2Q9C040 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM2Q9C040 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM2Q9C040 AL117328.2-201ENST00000624617 1940 ntBASIC20.38■□□□□ 0.85
TRIM2Q9C040 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM2Q9C040 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM2Q9C040 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM2Q9C040 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM2Q9C040 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 LINC01529-204ENST00000636474 1715 ntBASIC20.37■□□□□ 0.85
TRIM2Q9C040 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.37■□□□□ 0.85
TRIM2Q9C040 AC010997.5-201ENST00000609182 354 ntBASIC20.37■□□□□ 0.85
TRIM2Q9C040 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM2Q9C040 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 AC079834.2-201ENST00000609776 1949 ntBASIC20.37■□□□□ 0.85
TRIM2Q9C040 ESRRAP2-201ENST00000418437 1549 ntBASIC20.37■□□□□ 0.85
TRIM2Q9C040 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM2Q9C040 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM2Q9C040 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM2Q9C040 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM2Q9C040 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM2Q9C040 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 UNC93B8-201ENST00000511903 705 ntBASIC20.35■□□□□ 0.85
TRIM2Q9C040 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM2Q9C040 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM2Q9C040 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM2Q9C040 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM2Q9C040 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM2Q9C040 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM2Q9C040 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM2Q9C040 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM2Q9C040 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
TRIM2Q9C040 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM2Q9C040 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM2Q9C040 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM2Q9C040 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM2Q9C040 TSPY9P-201ENST00000440215 945 ntBASIC20.33■□□□□ 0.85
TRIM2Q9C040 TSPY11P-201ENST00000442607 1045 ntBASIC20.33■□□□□ 0.85
TRIM2Q9C040 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM2Q9C040 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM2Q9C040 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM2Q9C040 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM2Q9C040 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM2Q9C040 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms