Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 AC105233.4-201ENST00000642045 216 ntBASIC23.86■■□□□ 1.41
ZNF558Q96NG5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.86■■□□□ 1.41
ZNF558Q96NG5 AC142381.3-201ENST00000568208 1670 ntBASIC23.86■■□□□ 1.41
ZNF558Q96NG5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF558Q96NG5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
ZNF558Q96NG5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.85■■□□□ 1.41
ZNF558Q96NG5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 AC138932.3-201ENST00000567634 1902 ntBASIC23.84■■□□□ 1.41
ZNF558Q96NG5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF558Q96NG5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.83■■□□□ 1.41
ZNF558Q96NG5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
ZNF558Q96NG5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZNF558Q96NG5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZNF558Q96NG5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF558Q96NG5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF558Q96NG5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF558Q96NG5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.79■■□□□ 1.4
ZNF558Q96NG5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.78■■□□□ 1.4
ZNF558Q96NG5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF558Q96NG5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF558Q96NG5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF558Q96NG5 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF558Q96NG5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.77■■□□□ 1.4
ZNF558Q96NG5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms