Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Uhrf1Q8VDF2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uhrf1Q8VDF2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Gm12441-201ENSMUST00000121806 588 ntBASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.59■□□□□ 0.89
Uhrf1Q8VDF2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Uhrf1Q8VDF2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Uhrf1Q8VDF2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uhrf1Q8VDF2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uhrf1Q8VDF2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Nespas-201ENSMUST00000143738 1083 ntBASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uhrf1Q8VDF2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.54■□□□□ 0.88
Uhrf1Q8VDF2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Uhrf1Q8VDF2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uhrf1Q8VDF2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uhrf1Q8VDF2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Gm10653-202ENSMUST00000139570 835 ntBASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.52■□□□□ 0.88
Uhrf1Q8VDF2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uhrf1Q8VDF2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms