Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc47a1Q8K0H1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc47a1Q8K0H1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc47a1Q8K0H1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc47a1Q8K0H1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc47a1Q8K0H1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Slc47a1Q8K0H1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc47a1Q8K0H1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc47a1Q8K0H1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc47a1Q8K0H1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc47a1Q8K0H1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.44■□□□□ 0.7
Slc47a1Q8K0H1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc47a1Q8K0H1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc47a1Q8K0H1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc47a1Q8K0H1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc47a1Q8K0H1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc47a1Q8K0H1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc47a1Q8K0H1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc47a1Q8K0H1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Slc47a1Q8K0H1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc47a1Q8K0H1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc47a1Q8K0H1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc47a1Q8K0H1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Slc47a1Q8K0H1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms