Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sox30Q8CGW4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox30Q8CGW4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.77■■□□□ 1.08
Sox30Q8CGW4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
Sox30Q8CGW4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.76■■□□□ 1.07
Sox30Q8CGW4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sox30Q8CGW4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.75■■□□□ 1.07
Sox30Q8CGW4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sox30Q8CGW4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox30Q8CGW4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.73■■□□□ 1.07
Sox30Q8CGW4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox30Q8CGW4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sox30Q8CGW4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Golph3-205ENSMUST00000228671 2842 ntBASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox30Q8CGW4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms