Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn3bQ8BHK2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn3bQ8BHK2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn3bQ8BHK2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn3bQ8BHK2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn3bQ8BHK2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3bQ8BHK2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3bQ8BHK2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3bQ8BHK2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3bQ8BHK2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn3bQ8BHK2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn3bQ8BHK2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn3bQ8BHK2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn3bQ8BHK2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn3bQ8BHK2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Gm14523-201ENSMUST00000117260 558 ntBASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scn3bQ8BHK2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn3bQ8BHK2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn3bQ8BHK2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn3bQ8BHK2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn3bQ8BHK2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn3bQ8BHK2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn3bQ8BHK2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scn3bQ8BHK2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn3bQ8BHK2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn3bQ8BHK2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms