Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Slc5a7Q8BGY9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Slc5a7Q8BGY9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.35■□□□□ 0.37
Slc5a7Q8BGY9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc5a7Q8BGY9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc5a7Q8BGY9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc5a7Q8BGY9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc5a7Q8BGY9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc5a7Q8BGY9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc5a7Q8BGY9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc5a7Q8BGY9 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.32■□□□□ 0.36
Slc5a7Q8BGY9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc5a7Q8BGY9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.3■□□□□ 0.36
Slc5a7Q8BGY9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc5a7Q8BGY9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc5a7Q8BGY9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc5a7Q8BGY9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc5a7Q8BGY9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Slc5a7Q8BGY9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc5a7Q8BGY9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc5a7Q8BGY9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Slc5a7Q8BGY9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms