Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chek1O35280 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Chek1O35280 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chek1O35280 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chek1O35280 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chek1O35280 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
Chek1O35280 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Scarna2-201ENSMUST00000157560 414 ntBASIC16.15■□□□□ 0.18
Chek1O35280 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Gm16437-201ENSMUST00000025669 507 ntBASIC16.15■□□□□ 0.18
Chek1O35280 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Chek1O35280 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chek1O35280 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chek1O35280 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chek1O35280 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chek1O35280 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.14■□□□□ 0.17
Chek1O35280 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.14■□□□□ 0.17
Chek1O35280 Gm9806-201ENSMUST00000051080 552 ntBASIC16.14■□□□□ 0.17
Chek1O35280 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chek1O35280 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chek1O35280 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.14■□□□□ 0.17
Chek1O35280 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chek1O35280 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chek1O35280 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chek1O35280 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chek1O35280 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.13■□□□□ 0.17
Chek1O35280 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chek1O35280 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chek1O35280 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.13■□□□□ 0.17
Chek1O35280 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chek1O35280 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chek1O35280 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chek1O35280 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.12■□□□□ 0.17
Chek1O35280 Golph3-205ENSMUST00000228671 2842 ntBASIC16.12■□□□□ 0.17
Chek1O35280 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.12■□□□□ 0.17
Chek1O35280 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Chek1O35280 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.12■□□□□ 0.17
Chek1O35280 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chek1O35280 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chek1O35280 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chek1O35280 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chek1O35280 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chek1O35280 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Chek1O35280 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.1■□□□□ 0.17
Chek1O35280 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.1■□□□□ 0.17
Chek1O35280 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chek1O35280 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.1■□□□□ 0.17
Chek1O35280 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.1■□□□□ 0.17
Chek1O35280 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms