Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-4-dv7A0A075B6C2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.64□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-4-dv7A0A075B6C2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav13-4-dv7A0A075B6C2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms