Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ASS1P2-201ENST00000439895 1223 ntBASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 AC087203.1-201ENST00000532111 1181 ntBASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 AC126335.2-201ENST00000623362 4637 ntBASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20BQ9P0W2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HMG20BQ9P0W2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PSMD4P1-201ENST00000433951 1109 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 ALG1L3P-201ENST00000503331 765 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AC055811.3-201ENST00000584952 686 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AP005264.6-204ENST00000588436 719 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 CSTP2-201ENST00000610599 398 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A21P-201ENST00000510875 1396 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A15P-201ENST00000514465 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A6P-201ENST00000515148 1394 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A16P-201ENST00000526662 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A9P-201ENST00000527940 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A5P-201ENST00000528738 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A14P-201ENST00000530386 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 FAM90A13P-201ENST00000534703 1395 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 AC073862.5-201ENST00000624129 2027 ntBASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMG20BQ9P0W2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 AC022080.1-201ENST00000366255 781 ntBASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMG20BQ9P0W2 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms