Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 AL353726.2-201ENST00000623259 884 ntBASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 AF013593.1-201ENST00000458074 1487 ntBASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.37□□□□□ -0.11
PPARGC1AQ9UBK2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AC019109.1-201ENST00000401725 1874 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AL512430.1-201ENST00000392575 860 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AC092573.1-201ENST00000433054 884 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 RNA5SP423-201ENST00000517127 109 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 CR383656.2-201ENST00000548656 2254 ntBASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
PPARGC1AQ9UBK2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 PES1P2-201ENST00000449745 1735 ntBASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.35□□□□□ -0.11
PPARGC1AQ9UBK2 NRADDP-202ENST00000641269 1585 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms