Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
APOC4P55056 Z98885.3-201ENST00000624882 1757 ntBASIC10.07□□□□□ -0.8
APOC4P55056 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC10.07□□□□□ -0.8
APOC4P55056 AP000244.1-201ENST00000424582 201 ntBASIC10.07□□□□□ -0.8
APOC4P55056 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 PSMD4P1-201ENST00000433951 1109 ntBASIC10.07□□□□□ -0.8
APOC4P55056 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 GALP-202ENST00000440823 889 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC10.07□□□□□ -0.8
APOC4P55056 AC104212.2-201ENST00000478813 628 ntBASIC10.07□□□□□ -0.8
APOC4P55056 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC10.07□□□□□ -0.8
APOC4P55056 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 C2orf69P1-201ENST00000563532 1093 ntBASIC10.07□□□□□ -0.8
APOC4P55056 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 NT5C-204ENST00000578337 582 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 RN7SL556P-201ENST00000582856 298 ntBASIC10.07□□□□□ -0.8
APOC4P55056 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 COQ4-204ENST00000608951 781 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
APOC4P55056 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
APOC4P55056 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOC4P55056 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
APOC4P55056 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOC4P55056 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 AC104581.4-201ENST00000623126 3052 ntBASIC10.06□□□□□ -0.8
APOC4P55056 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 LINP1-201ENST00000417112 917 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 FAM21EP-201ENST00000417804 985 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms