Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.31□□□□□ -0.12
CBX1P83916 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 KRT18P2-201ENST00000447938 1258 ntBASIC14.31□□□□□ -0.12
CBX1P83916 BX284668.4-201ENST00000453917 508 ntBASIC14.31□□□□□ -0.12
CBX1P83916 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CBX1P83916 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.31□□□□□ -0.12
CBX1P83916 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.31□□□□□ -0.12
CBX1P83916 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.31□□□□□ -0.12
CBX1P83916 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.31□□□□□ -0.12
CBX1P83916 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CBX1P83916 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.31□□□□□ -0.12
CBX1P83916 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 HADH-210ENST00000626637 1774 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.3□□□□□ -0.12
CBX1P83916 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 MX1-201ENST00000288383 2733 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CBX1P83916 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.3□□□□□ -0.12
CBX1P83916 AC079781.3-201ENST00000449110 356 ntBASIC14.3□□□□□ -0.12
CBX1P83916 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.3□□□□□ -0.12
CBX1P83916 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 AC093909.1-201ENST00000504731 1122 ntBASIC14.3□□□□□ -0.12
CBX1P83916 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.3□□□□□ -0.12
CBX1P83916 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.3□□□□□ -0.12
CBX1P83916 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CBX1P83916 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CBX1P83916 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.3□□□□□ -0.12
CBX1P83916 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CBX1P83916 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.3□□□□□ -0.12
CBX1P83916 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CBX1P83916 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC14.29□□□□□ -0.12
CBX1P83916 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 RN7SKP230-201ENST00000365642 335 ntBASIC14.29□□□□□ -0.12
CBX1P83916 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.29□□□□□ -0.12
CBX1P83916 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.29□□□□□ -0.12
CBX1P83916 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms