Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 AC004911.1-201ENST00000416316 871 ntBASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 GXYLT1P2-201ENST00000433312 1230 ntBASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDK11AQ9UQ88 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDK11AQ9UQ88 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDK11AQ9UQ88 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDK11AQ9UQ88 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC34.85■■■■□ 3.17
CDK11AQ9UQ88 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDK11AQ9UQ88 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.84■■■■□ 3.17
CDK11AQ9UQ88 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 AC135731.1-201ENST00000569415 2548 ntBASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDK11AQ9UQ88 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.82■■■■□ 3.17
CDK11AQ9UQ88 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CDK11AQ9UQ88 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.82■■■■□ 3.16
CDK11AQ9UQ88 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.82■■■■□ 3.16
CDK11AQ9UQ88 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
CDK11AQ9UQ88 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 AC144652.1-201ENST00000609974 1624 ntBASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 LINC01529-204ENST00000636474 1715 ntBASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 EI24-213ENST00000618552 1747 ntTSL 5 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDK11AQ9UQ88 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.8■■■■□ 3.16
CDK11AQ9UQ88 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.8■■■■□ 3.16
CDK11AQ9UQ88 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CDK11AQ9UQ88 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CDK11AQ9UQ88 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 NT5C3AP1-201ENST00000394500 1012 ntBASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CDK11AQ9UQ88 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CDK11AQ9UQ88 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CDK11AQ9UQ88 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CDK11AQ9UQ88 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CDK11AQ9UQ88 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CDK11AQ9UQ88 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.76■■■■□ 3.16
CDK11AQ9UQ88 AC105233.4-201ENST00000642045 216 ntBASIC34.76■■■■□ 3.16
CDK11AQ9UQ88 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CDK11AQ9UQ88 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CDK11AQ9UQ88 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.75■■■■□ 3.15
CDK11AQ9UQ88 STX4-202ENST00000394998 1498 ntTSL 2 BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms