Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Gm40881-201ENSMUST00000223397 166 ntBASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssr1Q9CY50 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ssr1Q9CY50 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.41■■□□□ 1.02
Ssr1Q9CY50 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.41■■□□□ 1.02
Ssr1Q9CY50 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ssr1Q9CY50 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Ssr1Q9CY50 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssr1Q9CY50 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssr1Q9CY50 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssr1Q9CY50 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssr1Q9CY50 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssr1Q9CY50 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.38■■□□□ 1.01
Ssr1Q9CY50 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssr1Q9CY50 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssr1Q9CY50 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms