Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL21A1Q96P44 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL21A1Q96P44 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL21A1Q96P44 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL21A1Q96P44 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.01■□□□□ 0.95
COL21A1Q96P44 AL356441.2-201ENST00000443009 864 ntBASIC21.01■□□□□ 0.95
COL21A1Q96P44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.01■□□□□ 0.95
COL21A1Q96P44 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL21A1Q96P44 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.01■□□□□ 0.95
COL21A1Q96P44 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.01■□□□□ 0.95
COL21A1Q96P44 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL21A1Q96P44 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21■□□□□ 0.95
COL21A1Q96P44 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL21A1Q96P44 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
COL21A1Q96P44 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21■□□□□ 0.95
COL21A1Q96P44 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21■□□□□ 0.95
COL21A1Q96P44 MIR6724-1-201ENST00000616420 92 ntBASIC21■□□□□ 0.95
COL21A1Q96P44 MIR6724-2-201ENST00000616483 92 ntBASIC21■□□□□ 0.95
COL21A1Q96P44 MIR6724-4-201ENST00000617390 92 ntBASIC21■□□□□ 0.95
COL21A1Q96P44 MIR6724-3-201ENST00000622482 92 ntBASIC21■□□□□ 0.95
COL21A1Q96P44 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21■□□□□ 0.95
COL21A1Q96P44 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL21A1Q96P44 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL21A1Q96P44 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
COL21A1Q96P44 AC005703.6-201ENST00000623265 1329 ntBASIC21■□□□□ 0.95
COL21A1Q96P44 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL21A1Q96P44 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL21A1Q96P44 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL21A1Q96P44 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COL21A1Q96P44 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL21A1Q96P44 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.99■□□□□ 0.95
COL21A1Q96P44 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.99■□□□□ 0.95
COL21A1Q96P44 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL21A1Q96P44 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL21A1Q96P44 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL21A1Q96P44 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL21A1Q96P44 AC233723.2-201ENST00000623798 2106 ntBASIC20.98■□□□□ 0.95
COL21A1Q96P44 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.97■□□□□ 0.95
COL21A1Q96P44 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL21A1Q96P44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL21A1Q96P44 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL21A1Q96P44 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COL21A1Q96P44 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL21A1Q96P44 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL21A1Q96P44 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL21A1Q96P44 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL21A1Q96P44 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL21A1Q96P44 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL21A1Q96P44 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL21A1Q96P44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL21A1Q96P44 C1orf229-201ENST00000623686 2258 ntBASIC20.94■□□□□ 0.94
COL21A1Q96P44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL21A1Q96P44 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL21A1Q96P44 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL21A1Q96P44 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL21A1Q96P44 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COL21A1Q96P44 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.93■□□□□ 0.94
COL21A1Q96P44 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL21A1Q96P44 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms