Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NPAS4Q8IUM7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.18■■□□□ 1.46
NPAS4Q8IUM7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 LINC02228-203ENST00000641970 1355 ntBASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 TERF1P2-201ENST00000583350 1212 ntBASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.17■■□□□ 1.46
NPAS4Q8IUM7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 KRT18P14-201ENST00000534205 1250 ntBASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NPAS4Q8IUM7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 AC144652.1-201ENST00000609974 1624 ntBASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 NTF6G-201ENST00000591094 616 ntBASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 LINC01529-204ENST00000636474 1715 ntBASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NPAS4Q8IUM7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPAS4Q8IUM7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NPAS4Q8IUM7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
NPAS4Q8IUM7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NPAS4Q8IUM7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
NPAS4Q8IUM7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 AC142381.3-201ENST00000568208 1670 ntBASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 AC004911.1-201ENST00000416316 871 ntBASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 AC138932.3-201ENST00000567634 1902 ntBASIC24.12■■□□□ 1.45
NPAS4Q8IUM7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.11■■□□□ 1.45
NPAS4Q8IUM7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms