Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm11Q8BUV6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lsm11Q8BUV6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm11Q8BUV6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm11Q8BUV6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm11Q8BUV6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm11Q8BUV6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm11Q8BUV6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm11Q8BUV6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm11Q8BUV6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms