Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smco3Q8BQM7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smco3Q8BQM7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smco3Q8BQM7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco3Q8BQM7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.34■□□□□ 0.21
Smco3Q8BQM7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smco3Q8BQM7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Smco3Q8BQM7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smco3Q8BQM7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smco3Q8BQM7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smco3Q8BQM7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco3Q8BQM7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco3Q8BQM7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco3Q8BQM7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms