Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Gm5812-201ENSMUST00000061073 957 ntBASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8d-1Q5R1H8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.22■□□□□ 0.19
Trav8d-1Q5R1H8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8d-1Q5R1H8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav8d-1Q5R1H8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav8d-1Q5R1H8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.21■□□□□ 0.18
Trav8d-1Q5R1H8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8d-1Q5R1H8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Gm15546-201ENSMUST00000122095 826 ntBASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8d-1Q5R1H8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Gm13238-201ENSMUST00000117655 780 ntBASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms