Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRTCAP3Q53RY4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 AL137784.2-201ENST00000607332 1000 ntBASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRTCAP3Q53RY4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 AC010525.1-201ENST00000585559 441 ntBASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.04■□□□□ 0.8
KRTCAP3Q53RY4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 MIR6084-201ENST00000622012 110 ntBASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 LINC02228-203ENST00000641970 1355 ntBASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.03■□□□□ 0.8
KRTCAP3Q53RY4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
KRTCAP3Q53RY4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.02■□□□□ 0.79
KRTCAP3Q53RY4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 RARRES2P11-201ENST00000635158 484 ntBASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRTCAP3Q53RY4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KRTCAP3Q53RY4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms