Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hnf4aP49698 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Hnf4aP49698 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.25■□□□□ 0.67
Hnf4aP49698 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.25■□□□□ 0.67
Hnf4aP49698 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hnf4aP49698 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hnf4aP49698 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hnf4aP49698 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hnf4aP49698 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.24■□□□□ 0.67
Hnf4aP49698 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.24■□□□□ 0.67
Hnf4aP49698 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Hnf4aP49698 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hnf4aP49698 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hnf4aP49698 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.23■□□□□ 0.67
Hnf4aP49698 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hnf4aP49698 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hnf4aP49698 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Hnf4aP49698 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.22■□□□□ 0.67
Hnf4aP49698 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.22■□□□□ 0.67
Hnf4aP49698 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hnf4aP49698 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hnf4aP49698 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.21■□□□□ 0.67
Hnf4aP49698 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hnf4aP49698 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
Hnf4aP49698 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
Hnf4aP49698 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hnf4aP49698 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hnf4aP49698 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hnf4aP49698 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hnf4aP49698 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.2■□□□□ 0.66
Hnf4aP49698 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.2■□□□□ 0.66
Hnf4aP49698 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hnf4aP49698 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hnf4aP49698 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hnf4aP49698 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hnf4aP49698 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hnf4aP49698 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hnf4aP49698 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hnf4aP49698 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Hnf4aP49698 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hnf4aP49698 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hnf4aP49698 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hnf4aP49698 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hnf4aP49698 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hnf4aP49698 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hnf4aP49698 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hnf4aP49698 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.17■□□□□ 0.66
Hnf4aP49698 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hnf4aP49698 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hnf4aP49698 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Hnf4aP49698 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hnf4aP49698 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hnf4aP49698 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hnf4aP49698 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms