Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hes1P35428 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hes1P35428 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hes1P35428 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
Hes1P35428 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hes1P35428 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.35■□□□□ 0.21
Hes1P35428 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hes1P35428 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hes1P35428 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Hes1P35428 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.35■□□□□ 0.21
Hes1P35428 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Gm9870-201ENSMUST00000063874 645 ntBASIC16.34■□□□□ 0.21
Hes1P35428 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes1P35428 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hes1P35428 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hes1P35428 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.33■□□□□ 0.21
Hes1P35428 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Hes1P35428 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
Hes1P35428 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hes1P35428 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Gm7143-201ENSMUST00000222811 859 ntBASIC16.33■□□□□ 0.2
Hes1P35428 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes1P35428 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hes1P35428 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Hes1P35428 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Hes1P35428 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Hes1P35428 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Hes1P35428 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes1P35428 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.31■□□□□ 0.2
Hes1P35428 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.31■□□□□ 0.2
Hes1P35428 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes1P35428 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.3■□□□□ 0.2
Hes1P35428 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hes1P35428 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hes1P35428 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hes1P35428 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hes1P35428 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hes1P35428 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes1P35428 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Hes1P35428 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hes1P35428 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hes1P35428 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Hes1P35428 Gm15039-201ENSMUST00000118914 875 ntBASIC16.29■□□□□ 0.2
Hes1P35428 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.29■□□□□ 0.2
Hes1P35428 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.29■□□□□ 0.2
Hes1P35428 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.29■□□□□ 0.2
Hes1P35428 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Iqck-206ENSMUST00000208658 2891 ntBASIC16.29■□□□□ 0.2
Hes1P35428 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.29■□□□□ 0.2
Hes1P35428 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes1P35428 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes1P35428 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Hes1P35428 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes1P35428 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes1P35428 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes1P35428 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes1P35428 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms