Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
NDUFS3O75489 AC009102.2-201ENST00000606772 1639 ntBASIC22.2■■□□□ 1.15
NDUFS3O75489 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NDUFS3O75489 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.2■■□□□ 1.14
NDUFS3O75489 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.2■■□□□ 1.14
NDUFS3O75489 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.2■■□□□ 1.14
NDUFS3O75489 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.2■■□□□ 1.14
NDUFS3O75489 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.2■■□□□ 1.14
NDUFS3O75489 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NDUFS3O75489 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NDUFS3O75489 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NDUFS3O75489 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
NDUFS3O75489 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.19■■□□□ 1.14
NDUFS3O75489 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.19■■□□□ 1.14
NDUFS3O75489 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.19■■□□□ 1.14
NDUFS3O75489 FP325331.1-202ENST00000623531 1380 ntBASIC22.19■■□□□ 1.14
NDUFS3O75489 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
NDUFS3O75489 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NDUFS3O75489 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
NDUFS3O75489 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NDUFS3O75489 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
NDUFS3O75489 LINC01529-204ENST00000636474 1715 ntBASIC22.18■■□□□ 1.14
NDUFS3O75489 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NDUFS3O75489 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.18■■□□□ 1.14
NDUFS3O75489 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
NDUFS3O75489 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
NDUFS3O75489 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NDUFS3O75489 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.17■■□□□ 1.14
NDUFS3O75489 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.17■■□□□ 1.14
NDUFS3O75489 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
NDUFS3O75489 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.17■■□□□ 1.14
NDUFS3O75489 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.17■■□□□ 1.14
NDUFS3O75489 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.17■■□□□ 1.14
NDUFS3O75489 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.17■■□□□ 1.14
NDUFS3O75489 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NDUFS3O75489 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NDUFS3O75489 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
NDUFS3O75489 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.16■■□□□ 1.14
NDUFS3O75489 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.16■■□□□ 1.14
NDUFS3O75489 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NDUFS3O75489 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NDUFS3O75489 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NDUFS3O75489 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFS3O75489 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
NDUFS3O75489 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.14■■□□□ 1.14
NDUFS3O75489 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.14■■□□□ 1.14
NDUFS3O75489 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NDUFS3O75489 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
NDUFS3O75489 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.14■■□□□ 1.13
NDUFS3O75489 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.14■■□□□ 1.13
NDUFS3O75489 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.14■■□□□ 1.13
NDUFS3O75489 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NDUFS3O75489 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NDUFS3O75489 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NDUFS3O75489 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NDUFS3O75489 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NDUFS3O75489 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NDUFS3O75489 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NDUFS3O75489 AL356740.2-201ENST00000601559 647 ntBASIC22.13■■□□□ 1.13
NDUFS3O75489 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.13■■□□□ 1.13
NDUFS3O75489 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
NDUFS3O75489 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.13■■□□□ 1.13
NDUFS3O75489 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NDUFS3O75489 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms