Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 KRT18P5-201ENST00000436075 1291 ntBASIC22.09■■□□□ 1.13
PCDHGA12O60330 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 AC141586.4-201ENST00000624558 1573 ntBASIC22.08■■□□□ 1.13
PCDHGA12O60330 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA12O60330 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA12O60330 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA12O60330 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
PCDHGA12O60330 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA12O60330 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHGA12O60330 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHGA12O60330 AL137784.2-201ENST00000607332 1000 ntBASIC22.08■■□□□ 1.13
PCDHGA12O60330 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHGA12O60330 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDHGA12O60330 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHGA12O60330 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 AC027612.3-201ENST00000413684 1047 ntBASIC22.07■■□□□ 1.12
PCDHGA12O60330 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 AC123595.1-201ENST00000440769 1046 ntBASIC22.07■■□□□ 1.12
PCDHGA12O60330 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 IKBKGP1-201ENST00000612193 1073 ntBASIC22.07■■□□□ 1.12
PCDHGA12O60330 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 AL031602.1-201ENST00000633169 911 ntBASIC22.07■■□□□ 1.12
PCDHGA12O60330 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA12O60330 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGA12O60330 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA12O60330 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 SLC47A1P1-202ENST00000449666 945 ntBASIC22.06■■□□□ 1.12
PCDHGA12O60330 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA12O60330 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGA12O60330 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA12O60330 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA12O60330 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA12O60330 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L2-201ENST00000561772 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L6-201ENST00000626483 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L1-201ENST00000627662 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L8-201ENST00000629013 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L3-201ENST00000630187 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L7-201ENST00000630678 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 DUX4L5-201ENST00000630834 1275 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA12O60330 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA12O60330 AC133561.1-201ENST00000568600 2415 ntBASIC22.05■■□□□ 1.12
PCDHGA12O60330 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGA12O60330 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 IGHV3-19-201ENST00000521488 291 ntBASIC22.04■■□□□ 1.12
PCDHGA12O60330 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.04■■□□□ 1.12
PCDHGA12O60330 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA12O60330 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms