Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.27■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15-2-dv6-2A0A075B650 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav15-2-dv6-2A0A075B650 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Mir6538-201ENSMUST00000183713 110 ntBASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms