Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4-2A0A075B638 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-2A0A075B638 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-2A0A075B638 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-2A0A075B638 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4-2A0A075B638 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4-2A0A075B638 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4-2A0A075B638 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Golph3-205ENSMUST00000228671 2842 ntBASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4-2A0A075B638 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4-2A0A075B638 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4-2A0A075B638 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav4-2A0A075B638 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav4-2A0A075B638 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav4-2A0A075B638 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav4-2A0A075B638 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms