Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm14497-201ENSMUST00000119537 580 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm13445-201ENSMUST00000121664 307 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm26976-201ENSMUST00000182929 908 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm37852-201ENSMUST00000193027 350 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm37365-201ENSMUST00000193109 409 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm45120-201ENSMUST00000208880 408 ntBASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Syne3Q4FZC9 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm25562-201ENSMUST00000104608 133 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm14165-201ENSMUST00000121456 952 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Syne3Q4FZC9 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms