Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm37302-201ENSMUST00000192958 2998 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm11952-201ENSMUST00000121172 821 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm8737-201ENSMUST00000122208 642 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm23045-201ENSMUST00000175041 96 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm19927-201ENSMUST00000185792 781 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm33080-201ENSMUST00000205429 172 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm5189-201ENSMUST00000221796 261 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm25580-201ENSMUST00000083409 327 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.5□□□□□ -0.89
Lysmd4Q8CC84 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lysmd4Q8CC84 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms