Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP7AQ04656 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATP7AQ04656 AL358781.1-202ENST00000321081 1360 ntBASIC19.75■□□□□ 0.75
ATP7AQ04656 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 CDC20P1-201ENST00000488829 1500 ntBASIC19.74■□□□□ 0.75
ATP7AQ04656 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP7AQ04656 HINT1-204ENST00000506908 681 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP7AQ04656 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ATP7AQ04656 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP7AQ04656 AL139317.2-201ENST00000556998 158 ntBASIC19.74■□□□□ 0.75
ATP7AQ04656 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP7AQ04656 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 AC111170.3-201ENST00000624282 2464 ntBASIC19.74■□□□□ 0.75
ATP7AQ04656 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 AGAP10P-201ENST00000454844 2418 ntBASIC19.74■□□□□ 0.75
ATP7AQ04656 AC005912.2-201ENST00000619492 2400 ntBASIC19.74■□□□□ 0.75
ATP7AQ04656 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP7AQ04656 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP7AQ04656 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP7AQ04656 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP7AQ04656 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 AC106881.1-201ENST00000605849 3329 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 LINC00638-201ENST00000555578 2518 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 AC108024.1-201ENST00000626286 1721 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 JPT2-203ENST00000382711 894 ntTSL 4 BASIC19.73■□□□□ 0.75
ATP7AQ04656 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP7AQ04656 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.73■□□□□ 0.75
ATP7AQ04656 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 HNRNPA1P72-201ENST00000529511 967 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 PEBP1P1-201ENST00000554856 510 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP7AQ04656 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 AC244154.1-201ENST00000620148 1555 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ATP7AQ04656 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP7AQ04656 HNRNPLP1-201ENST00000421896 1501 ntBASIC19.73■□□□□ 0.75
ATP7AQ04656 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATP7AQ04656 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 AC131235.2-201ENST00000445553 1057 ntBASIC19.72■□□□□ 0.75
ATP7AQ04656 ST3GAL1P1-201ENST00000513810 1014 ntBASIC19.72■□□□□ 0.75
ATP7AQ04656 AC079601.2-201ENST00000547729 775 ntBASIC19.72■□□□□ 0.75
ATP7AQ04656 AC099552.4-201ENST00000624248 949 ntBASIC19.72■□□□□ 0.75
ATP7AQ04656 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP7AQ04656 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP7AQ04656 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP7AQ04656 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP7AQ04656 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP7AQ04656 HNRNPA1P9-201ENST00000450624 950 ntBASIC19.71■□□□□ 0.75
ATP7AQ04656 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP7AQ04656 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP7AQ04656 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms