Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TcraP01849 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC7.75□□□□□ -1.17
TcraP01849 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
TcraP01849 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TcraP01849 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
TcraP01849 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC7.75□□□□□ -1.17
TcraP01849 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm4760-201ENSMUST00000119663 1030 ntBASIC7.75□□□□□ -1.17
TcraP01849 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm24749-201ENSMUST00000157838 343 ntBASIC7.75□□□□□ -1.17
TcraP01849 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm8815-201ENSMUST00000173809 620 ntBASIC7.75□□□□□ -1.17
TcraP01849 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm43667-201ENSMUST00000198616 1095 ntBASIC7.75□□□□□ -1.17
TcraP01849 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
TcraP01849 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
TcraP01849 Gm19208-201ENSMUST00000213861 912 ntBASIC7.75□□□□□ -1.17
TcraP01849 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm270-201ENSMUST00000223010 976 ntBASIC7.75□□□□□ -1.17
TcraP01849 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TcraP01849 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TcraP01849 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
TcraP01849 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC7.75□□□□□ -1.17
TcraP01849 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
TcraP01849 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gm43615-201ENSMUST00000197465 1773 ntBASIC7.74□□□□□ -1.17
TcraP01849 Gm33366-201ENSMUST00000195583 3827 ntBASIC7.74□□□□□ -1.17
TcraP01849 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
TcraP01849 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gm37242-201ENSMUST00000191873 2085 ntBASIC7.74□□□□□ -1.17
TcraP01849 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TcraP01849 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TcraP01849 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC7.74□□□□□ -1.17
TcraP01849 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TcraP01849 Gm23596-201ENSMUST00000104304 132 ntBASIC7.74□□□□□ -1.17
TcraP01849 Gm11509-201ENSMUST00000117358 325 ntBASIC7.74□□□□□ -1.17
TcraP01849 Gm15711-201ENSMUST00000118889 535 ntBASIC7.74□□□□□ -1.17
TcraP01849 Gm12570-201ENSMUST00000122047 1030 ntBASIC7.74□□□□□ -1.17
TcraP01849 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC7.74□□□□□ -1.17
TcraP01849 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC7.74□□□□□ -1.17
TcraP01849 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC7.74□□□□□ -1.17
TcraP01849 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TcraP01849 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TcraP01849 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms