Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 AC131235.2-201ENST00000445553 1057 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 AC005011.1-201ENST00000455206 210 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 RN7SL2-201ENST00000490232 300 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 RN7SL4P-201ENST00000584058 295 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 OR4C3-202ENST00000611380 597 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 AL591926.3-201ENST00000611630 238 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 AC127002.1-201ENST00000619123 455 ntBASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC42BPAQ5VT25 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 U3.41-201ENST00000408711 219 ntBASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 AKR1C6P-201ENST00000432950 983 ntBASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 CYP4F10P-201ENST00000589560 752 ntBASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 RBM22P2-201ENST00000393978 1814 ntBASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 AC023830.3-201ENST00000612995 1455 ntBASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42BPAQ5VT25 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42BPAQ5VT25 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 PPY-202ENST00000587006 431 ntTSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC108673.2-201ENST00000608909 565 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 SLC6A6P1-201ENST00000413933 1850 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 THAP4-203ENST00000402545 833 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 PRADC1P1-201ENST00000412317 525 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC004910.1-201ENST00000433493 787 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 PEBP1P1-201ENST00000554856 510 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 Z93930.2-203ENST00000585003 516 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC148476.1-201ENST00000622182 705 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AP000897.1-201ENST00000584036 1613 ntBASIC20.07■□□□□ 0.8
CDC42BPAQ5VT25 AC018445.4-201ENST00000624066 2291 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms