Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 LRRC59-203ENST00000576448 1531 ntBASIC10.87□□□□□ -0.67
LINC01559Q495D7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01559Q495D7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01559Q495D7 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PCF11-AS1-201ENST00000602322 1516 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 Y_RNA.505-201ENST00000384489 102 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 RNU6-883P-201ENST00000384597 107 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AL357078.2-201ENST00000416486 427 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 BX842568.4-201ENST00000421222 227 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 UBE2V1P1-201ENST00000430836 445 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC097493.3-201ENST00000509725 367 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 SPDYE18-201ENST00000510091 1050 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC084759.1-201ENST00000561168 290 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC025678.2-201ENST00000562061 970 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC007599.1-201ENST00000568688 1174 ntBASIC10.86□□□□□ -0.67
LINC01559Q495D7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01559Q495D7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01559Q495D7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms