Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC139713.2-207ENST00000641556 1292 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AL031587.5-201ENST00000624344 1849 ntBASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AC012358.2-201ENST00000430010 1434 ntBASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 KRT8P38-201ENST00000441370 1430 ntBASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 PGAM1P11-201ENST00000416729 680 ntBASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPO2Q9UMS6 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 PI4KAP2-201ENST00000360806 2080 ntBASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SYNPO2Q9UMS6 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 OR2I1P-209ENST00000641730 5365 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 KRT18P33-201ENST00000398525 1043 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 TUBB2BP1-201ENST00000404155 871 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 SNORA47-201ENST00000458862 138 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 ABHD17AP9-201ENST00000561925 548 ntBASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNPO2Q9UMS6 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms