Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.29□□□□□ -0.44
AP3S1Q92572 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
AP3S1Q92572 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP3S1Q92572 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 AC091181.1-201ENST00000623762 2098 ntBASIC12.28□□□□□ -0.44
AP3S1Q92572 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 MIR940-201ENST00000401276 94 ntBASIC12.28□□□□□ -0.44
AP3S1Q92572 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S1Q92572 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 CICP12-201ENST00000455801 843 ntBASIC12.28□□□□□ -0.44
AP3S1Q92572 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 AC135586.1-201ENST00000539323 574 ntBASIC12.28□□□□□ -0.44
AP3S1Q92572 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.28□□□□□ -0.44
AP3S1Q92572 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.28□□□□□ -0.44
AP3S1Q92572 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 AC100757.3-201ENST00000622361 1406 ntBASIC12.28□□□□□ -0.44
AP3S1Q92572 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
AP3S1Q92572 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S1Q92572 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
AP3S1Q92572 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.27□□□□□ -0.44
AP3S1Q92572 REXO1L6P-201ENST00000603433 1515 ntBASIC12.27□□□□□ -0.44
AP3S1Q92572 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.27□□□□□ -0.44
AP3S1Q92572 CICP9-201ENST00000444451 1913 ntBASIC12.27□□□□□ -0.44
AP3S1Q92572 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
AP3S1Q92572 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
AP3S1Q92572 CTAGE13P-201ENST00000416709 2446 ntBASIC12.27□□□□□ -0.44
AP3S1Q92572 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S1Q92572 AL354861.3-201ENST00000600140 2412 ntBASIC12.27□□□□□ -0.44
AP3S1Q92572 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.27□□□□□ -0.45
AP3S1Q92572 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.27□□□□□ -0.45
AP3S1Q92572 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S1Q92572 SPDYE18-201ENST00000510091 1050 ntBASIC12.27□□□□□ -0.45
AP3S1Q92572 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S1Q92572 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S1Q92572 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 AL356740.1-201ENST00000602192 1297 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms