Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC025183.3-201ENST00000623526 1482 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 GK-202ENST00000378941 458 ntTSL 3 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 BNIP3P42-201ENST00000454982 569 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AL512310.5-201ENST00000551999 515 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RN7SL560P-201ENST00000577943 264 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 BNIP3P29-201ENST00000598302 571 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 AC011447.5-201ENST00000616168 564 ntBASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTN4IP1Q8WWV3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 HMGA1P1-201ENST00000415560 1062 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 HSPB1P2-201ENST00000448722 546 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 RPSAP36-202ENST00000494591 1261 ntBASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.78□□□□□ -0.52
RTN4IP1Q8WWV3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms