Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Gm6331-201ENSMUST00000217890 450 ntBASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Gm8796-201ENSMUST00000219122 936 ntBASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Gm5278-201ENSMUST00000055957 552 ntBASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Gm25514-201ENSMUST00000083860 135 ntBASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pkd1l3Q2EG98 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 AC159810.1-201ENSMUST00000214838 1480 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Rubie-203ENSMUST00000227803 2430 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm11411-201ENSMUST00000117951 719 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Rps3a3-201ENSMUST00000074680 795 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm24279-201ENSMUST00000104236 131 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm15707-201ENSMUST00000118804 996 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm45135-201ENSMUST00000206787 1184 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pkd1l3Q2EG98 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Pkd1l3Q2EG98 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms