Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.64■□□□□ 0.25
POLR3DP05423 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR3DP05423 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR3DP05423 AC025271.4-201ENST00000621477 1726 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
POLR3DP05423 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR3DP05423 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
POLR3DP05423 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR3DP05423 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.63■□□□□ 0.25
POLR3DP05423 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.63■□□□□ 0.25
POLR3DP05423 CTBP2P4-201ENST00000513884 920 ntBASIC16.63■□□□□ 0.25
POLR3DP05423 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.63■□□□□ 0.25
POLR3DP05423 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR3DP05423 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 AL031673.1-201ENST00000611460 466 ntBASIC16.63■□□□□ 0.25
POLR3DP05423 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 AC009084.3-201ENST00000623356 437 ntBASIC16.63■□□□□ 0.25
POLR3DP05423 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.63■□□□□ 0.25
POLR3DP05423 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 AL928654.5-201ENST00000624831 2501 ntBASIC16.63■□□□□ 0.25
POLR3DP05423 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR3DP05423 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
POLR3DP05423 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
POLR3DP05423 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 RCC2P1-201ENST00000452257 1476 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 AC131212.3-201ENST00000624087 4219 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
POLR3DP05423 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 RPL3P2-204ENST00000413027 1203 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 PRSS3P1-201ENST00000503996 742 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR3DP05423 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR3DP05423 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR3DP05423 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR3DP05423 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR3DP05423 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR3DP05423 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 AC072061.1-201ENST00000569710 2234 ntBASIC16.62■□□□□ 0.25
POLR3DP05423 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR3DP05423 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms