Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.07□□□□□ -0.8
CntfP51642 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
CntfP51642 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
CntfP51642 Gm25076-201ENSMUST00000104098 132 ntBASIC10.07□□□□□ -0.8
CntfP51642 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Gm16166-201ENSMUST00000118291 787 ntBASIC10.07□□□□□ -0.8
CntfP51642 Gm14942-201ENSMUST00000119642 336 ntBASIC10.07□□□□□ -0.8
CntfP51642 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.07□□□□□ -0.8
CntfP51642 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.07□□□□□ -0.8
CntfP51642 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
CntfP51642 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
CntfP51642 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.07□□□□□ -0.8
CntfP51642 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.07□□□□□ -0.8
CntfP51642 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
CntfP51642 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CntfP51642 Rims2-204ENSMUST00000226410 3685 ntBASIC10.06□□□□□ -0.8
CntfP51642 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.06□□□□□ -0.8
CntfP51642 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.06□□□□□ -0.8
CntfP51642 Gm12337-201ENSMUST00000119634 400 ntBASIC10.06□□□□□ -0.8
CntfP51642 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CntfP51642 Mir5120-201ENSMUST00000175020 78 ntBASIC10.06□□□□□ -0.8
CntfP51642 Mir6546-201ENSMUST00000184460 62 ntBASIC10.06□□□□□ -0.8
CntfP51642 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.06□□□□□ -0.8
CntfP51642 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.06□□□□□ -0.8
CntfP51642 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.06□□□□□ -0.8
CntfP51642 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CntfP51642 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.06□□□□□ -0.8
CntfP51642 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CntfP51642 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CntfP51642 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.06□□□□□ -0.8
CntfP51642 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.06□□□□□ -0.8
CntfP51642 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CntfP51642 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.05□□□□□ -0.8
CntfP51642 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
CntfP51642 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.05□□□□□ -0.8
CntfP51642 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.05□□□□□ -0.8
CntfP51642 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
CntfP51642 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CntfP51642 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CntfP51642 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
CntfP51642 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.05□□□□□ -0.8
CntfP51642 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CntfP51642 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CntfP51642 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.05□□□□□ -0.8
CntfP51642 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CntfP51642 Snord55-201ENSMUST00000174939 79 ntBASIC10.05□□□□□ -0.8
CntfP51642 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms