Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pfdn1Q9CWM4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Grk6-206ENSMUST00000224995 2971 ntBASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pfdn1Q9CWM4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.58■□□□□ 0.41
Pfdn1Q9CWM4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pfdn1Q9CWM4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pfdn1Q9CWM4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pfdn1Q9CWM4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pfdn1Q9CWM4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pfdn1Q9CWM4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms