Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
SCAF11Q99590 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF11Q99590 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF11Q99590 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.54■■■□□ 2.8
SCAF11Q99590 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC32.54■■■□□ 2.8
SCAF11Q99590 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF11Q99590 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
SCAF11Q99590 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC32.54■■■□□ 2.8
SCAF11Q99590 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
SCAF11Q99590 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC32.54■■■□□ 2.8
SCAF11Q99590 AC080038.1-201ENST00000611274 1154 ntBASIC32.54■■■□□ 2.8
SCAF11Q99590 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF11Q99590 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF11Q99590 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF11Q99590 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF11Q99590 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC32.53■■■□□ 2.8
SCAF11Q99590 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF11Q99590 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.53■■■□□ 2.8
SCAF11Q99590 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC32.53■■■□□ 2.8
SCAF11Q99590 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
SCAF11Q99590 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
SCAF11Q99590 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC32.52■■■□□ 2.8
SCAF11Q99590 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF11Q99590 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
SCAF11Q99590 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
SCAF11Q99590 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC32.52■■■□□ 2.8
SCAF11Q99590 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC32.52■■■□□ 2.8
SCAF11Q99590 AC073111.5-205ENST00000641717 521 ntBASIC32.52■■■□□ 2.8
SCAF11Q99590 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF11Q99590 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF11Q99590 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
SCAF11Q99590 CD37-213ENST00000598095 1598 ntTSL 2 BASIC32.51■■■□□ 2.79
SCAF11Q99590 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32.51■■■□□ 2.79
SCAF11Q99590 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF11Q99590 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC32.51■■■□□ 2.79
SCAF11Q99590 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF11Q99590 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
SCAF11Q99590 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF11Q99590 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
SCAF11Q99590 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC32.5■■■□□ 2.79
SCAF11Q99590 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
SCAF11Q99590 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC32.5■■■□□ 2.79
SCAF11Q99590 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 GXYLT1P5-201ENST00000614548 1189 ntBASIC32.5■■■□□ 2.79
SCAF11Q99590 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF11Q99590 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF11Q99590 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
SCAF11Q99590 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC32.49■■■□□ 2.79
SCAF11Q99590 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC32.49■■■□□ 2.79
SCAF11Q99590 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF11Q99590 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.49■■■□□ 2.79
SCAF11Q99590 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF11Q99590 USF2-207ENST00000595068 1612 ntTSL 5 BASIC32.49■■■□□ 2.79
SCAF11Q99590 ESRRAP2-201ENST00000418437 1549 ntBASIC32.49■■■□□ 2.79
SCAF11Q99590 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC32.48■■■□□ 2.79
SCAF11Q99590 AC141586.4-201ENST00000624558 1573 ntBASIC32.48■■■□□ 2.79
SCAF11Q99590 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
SCAF11Q99590 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC32.48■■■□□ 2.79
SCAF11Q99590 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
SCAF11Q99590 CDCA4P2-201ENST00000441182 718 ntBASIC32.48■■■□□ 2.79
SCAF11Q99590 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SCAF11Q99590 AC104771.1-201ENST00000603335 964 ntBASIC32.48■■■□□ 2.79
SCAF11Q99590 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.48■■■□□ 2.79
SCAF11Q99590 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC32.47■■■□□ 2.79
SCAF11Q99590 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCAF11Q99590 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCAF11Q99590 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCAF11Q99590 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCAF11Q99590 HLA-L-211ENST00000482052 1765 ntBASIC32.47■■■□□ 2.79
SCAF11Q99590 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC32.47■■■□□ 2.79
SCAF11Q99590 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC32.47■■■□□ 2.79
SCAF11Q99590 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCAF11Q99590 AC022211.4-201ENST00000625094 2161 ntBASIC32.47■■■□□ 2.79
SCAF11Q99590 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SCAF11Q99590 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SCAF11Q99590 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
SCAF11Q99590 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
SCAF11Q99590 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SCAF11Q99590 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SCAF11Q99590 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC32.45■■■□□ 2.79
SCAF11Q99590 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
SCAF11Q99590 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.44■■■□□ 2.78
SCAF11Q99590 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SCAF11Q99590 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SCAF11Q99590 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms