Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx2ipQ8VC66 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssx2ipQ8VC66 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssx2ipQ8VC66 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Gm7143-201ENSMUST00000222811 859 ntBASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssx2ipQ8VC66 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx2ipQ8VC66 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ssx2ipQ8VC66 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.39■□□□□ 0.86
Ssx2ipQ8VC66 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx2ipQ8VC66 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Ssx2ipQ8VC66 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ssx2ipQ8VC66 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ssx2ipQ8VC66 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ssx2ipQ8VC66 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssx2ipQ8VC66 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ssx2ipQ8VC66 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssx2ipQ8VC66 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Gm9870-201ENSMUST00000063874 645 ntBASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Ssx2ipQ8VC66 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssx2ipQ8VC66 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ssx2ipQ8VC66 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssx2ipQ8VC66 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.33■□□□□ 0.84
Ssx2ipQ8VC66 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssx2ipQ8VC66 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssx2ipQ8VC66 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssx2ipQ8VC66 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.32■□□□□ 0.84
Ssx2ipQ8VC66 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssx2ipQ8VC66 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ssx2ipQ8VC66 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms