Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Cmc4Q61908 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cmc4Q61908 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cmc4Q61908 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cmc4Q61908 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cmc4Q61908 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.64□□□□□ -0.07
Cmc4Q61908 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cmc4Q61908 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cmc4Q61908 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Cmc4Q61908 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.63□□□□□ -0.07
Cmc4Q61908 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cmc4Q61908 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cmc4Q61908 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cmc4Q61908 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.62□□□□□ -0.07
Cmc4Q61908 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cmc4Q61908 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.62□□□□□ -0.07
Cmc4Q61908 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cmc4Q61908 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cmc4Q61908 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cmc4Q61908 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cmc4Q61908 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cmc4Q61908 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.61□□□□□ -0.07
Cmc4Q61908 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cmc4Q61908 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cmc4Q61908 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cmc4Q61908 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Cmc4Q61908 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Cmc4Q61908 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cmc4Q61908 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cmc4Q61908 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.59□□□□□ -0.07
Cmc4Q61908 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.59□□□□□ -0.07
Cmc4Q61908 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.59□□□□□ -0.07
Cmc4Q61908 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cmc4Q61908 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Cmc4Q61908 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cmc4Q61908 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
Cmc4Q61908 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cmc4Q61908 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cmc4Q61908 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cmc4Q61908 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cmc4Q61908 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cmc4Q61908 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cmc4Q61908 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cmc4Q61908 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cmc4Q61908 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cmc4Q61908 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms