Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa3Q3UPR0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.24■□□□□ 0.35
Shisa3Q3UPR0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa3Q3UPR0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.22■□□□□ 0.35
Shisa3Q3UPR0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa3Q3UPR0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa3Q3UPR0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa3Q3UPR0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.18■□□□□ 0.34
Shisa3Q3UPR0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms