Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 PRM2YIL037C 1971 nt4.74□□□□□ -1.65
RPA49Q01080 CEG1YGL130W 1380 nt4.74□□□□□ -1.65
RPA49Q01080 GAS5YOL030W 1455 nt4.74□□□□□ -1.65
RPA49Q01080 APC1YNL172W 5247 nt4.73□□□□□ -1.65
RPA49Q01080 RMD1YDL001W 1293 nt4.73□□□□□ -1.65
RPA49Q01080 YEL045CYEL045C 426 nt4.73□□□□□ -1.65
RPA49Q01080 RNA15YGL044C 891 nt4.73□□□□□ -1.65
RPA49Q01080 CAX4YGR036C 720 nt4.73□□□□□ -1.65
RPA49Q01080 YHR137C-AYHR137C-A 651 nt4.73□□□□□ -1.65
RPA49Q01080 YLR364C-AYLR364C-A 123 nt4.73□□□□□ -1.65
RPA49Q01080 PEX12YMR026C 1200 nt4.73□□□□□ -1.65
RPA49Q01080 YHR182WYHR182W 2358 nt4.72□□□□□ -1.65
RPA49Q01080 YER158CYER158C 1722 nt4.72□□□□□ -1.65
RPA49Q01080 PGM2YMR105C 1710 nt4.72□□□□□ -1.65
RPA49Q01080 YDR249CYDR249C 1122 nt4.72□□□□□ -1.65
RPA49Q01080 YER133W-AYER133W-A 342 nt4.72□□□□□ -1.65
RPA49Q01080 NAT2YGR147C 867 nt4.72□□□□□ -1.65
RPA49Q01080 YLR374CYLR374C 390 nt4.72□□□□□ -1.65
RPA49Q01080 YMR082CYMR082C 357 nt4.72□□□□□ -1.65
RPA49Q01080 YNL217WYNL217W 981 nt4.72□□□□□ -1.65
RPA49Q01080 YPL278CYPL278C 303 nt4.72□□□□□ -1.65
RPA49Q01080 snR34snR34 203 nt4.72□□□□□ -1.65
RPA49Q01080 GSY1YFR015C 2127 nt4.72□□□□□ -1.65
RPA49Q01080 BOP2YLR267W 1713 nt4.72□□□□□ -1.65
RPA49Q01080 PHO12YHR215W 1404 nt4.72□□□□□ -1.65
RPA49Q01080 PHO11YAR071W 1404 nt4.72□□□□□ -1.65
RPA49Q01080 SEC9YGR009C 1956 nt4.71□□□□□ -1.66
RPA49Q01080 GGA1YDR358W 1674 nt4.71□□□□□ -1.66
RPA49Q01080 CNA1YLR433C 1662 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)CtK(CUU)C 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)D1tK(CUU)D1 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)D2tK(CUU)D2 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)E1tK(CUU)E1 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)E2tK(CUU)E2 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)FtK(CUU)F 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)G1tK(CUU)G1 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)G2tK(CUU)G2 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)G3tK(CUU)G3 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)ItK(CUU)I 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)JtK(CUU)J 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)KtK(CUU)K 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)MtK(CUU)M 73 nt4.71□□□□□ -1.66
RPA49Q01080 tK(CUU)PtK(CUU)P 73 nt4.71□□□□□ -1.66
RPA49Q01080 HPM1YIL110W 1134 nt4.71□□□□□ -1.66
RPA49Q01080 RFC2YJR068W 1062 nt4.71□□□□□ -1.66
RPA49Q01080 NMD4YLR363C 657 nt4.71□□□□□ -1.66
RPA49Q01080 BLM10YFL007W 6432 nt4.71□□□□□ -1.66
RPA49Q01080 MNN4YKL201C 3537 nt4.7□□□□□ -1.66
RPA49Q01080 TCM62YBR044C 1719 nt4.7□□□□□ -1.66
RPA49Q01080 PEX19YDL065C 1029 nt4.7□□□□□ -1.66
RPA49Q01080 ERG26YGL001C 1050 nt4.7□□□□□ -1.66
RPA49Q01080 YIL152WYIL152W 708 nt4.7□□□□□ -1.66
RPA49Q01080 MSA2YKR077W 1092 nt4.7□□□□□ -1.66
RPA49Q01080 YAR023CYAR023C 540 nt4.7□□□□□ -1.66
RPA49Q01080 SPO19YPL130W 672 nt4.7□□□□□ -1.66
RPA49Q01080 FZO1YBR179C 2568 nt4.7□□□□□ -1.66
RPA49Q01080 SWC3YAL011W 1878 nt4.7□□□□□ -1.66
RPA49Q01080 TFC7YOR110W 1308 nt4.7□□□□□ -1.66
RPA49Q01080 HUL4YJR036C 2679 nt4.69□□□□□ -1.66
RPA49Q01080 MED2YDL005C 1296 nt4.69□□□□□ -1.66
RPA49Q01080 SUI3YPL237W 858 nt4.69□□□□□ -1.66
RPA49Q01080 BSD2YBR290W 966 nt4.69□□□□□ -1.66
RPA49Q01080 TOS3YGL179C 1683 nt4.69□□□□□ -1.66
RPA49Q01080 ADY3YDL239C 2373 nt4.68□□□□□ -1.66
RPA49Q01080 GCV1YDR019C 1203 nt4.68□□□□□ -1.66
RPA49Q01080 ARD1YHR013C 717 nt4.68□□□□□ -1.66
RPA49Q01080 YIM1YMR152W 1098 nt4.68□□□□□ -1.66
RPA49Q01080 COG5YNL051W 1212 nt4.68□□□□□ -1.66
RPA49Q01080 YNL057WYNL057W 333 nt4.68□□□□□ -1.66
RPA49Q01080 LTO1YNL260C 597 nt4.68□□□□□ -1.66
RPA49Q01080 RAD17YOR368W 1206 nt4.68□□□□□ -1.66
RPA49Q01080 HIS4YCL030C 2400 nt4.67□□□□□ -1.66
RPA49Q01080 MET12YPL023C 1974 nt4.67□□□□□ -1.66
RPA49Q01080 LAP3YNL239W 1365 nt4.67□□□□□ -1.66
RPA49Q01080 TRE1YPL176C 2352 nt4.67□□□□□ -1.66
RPA49Q01080 GPP1YIL053W 753 nt4.67□□□□□ -1.66
RPA49Q01080 RRN9YMR270C 1098 nt4.67□□□□□ -1.66
RPA49Q01080 MVD1YNR043W 1191 nt4.67□□□□□ -1.66
RPA49Q01080 YPL114WYPL114W 420 nt4.67□□□□□ -1.66
RPA49Q01080 TIF5YPR041W 1218 nt4.67□□□□□ -1.66
RPA49Q01080 YBR219CYBR219C 384 nt4.67□□□□□ -1.66
RPA49Q01080 ARC40YBR234C 1155 nt4.67□□□□□ -1.66
RPA49Q01080 YDR098C-AYDR098C-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YDR210C-CYDR210C-C 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YDR261C-CYDR261C-C 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YDR316W-AYDR316W-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YDR365W-AYDR365W-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YER137C-AYER137C-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YER159C-AYER159C-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YGR027W-AYGR027W-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YGR038C-AYGR038C-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YGR161C-CYGR161C-C 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YJR026WYJR026W 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YJR028WYJR028W 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YAR010CYAR010C 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YLR157C-AYLR157C-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YLR227W-AYLR227W-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YLR256W-AYLR256W-A 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YML040WYML040W 1323 nt4.67□□□□□ -1.66
RPA49Q01080 YML045W-AYML045W-A 1323 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms