Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.15□□□□□ -0.14
Cks1bP61025 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cks1bP61025 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cks1bP61025 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cks1bP61025 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Cks1bP61025 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.14□□□□□ -0.15
Cks1bP61025 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.14□□□□□ -0.15
Cks1bP61025 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cks1bP61025 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Grk6-206ENSMUST00000224995 2971 ntBASIC14.14□□□□□ -0.15
Cks1bP61025 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1bP61025 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cks1bP61025 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.13□□□□□ -0.15
Cks1bP61025 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cks1bP61025 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1bP61025 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cks1bP61025 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cks1bP61025 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
Cks1bP61025 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.12□□□□□ -0.15
Cks1bP61025 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cks1bP61025 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cks1bP61025 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1bP61025 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cks1bP61025 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.11□□□□□ -0.15
Cks1bP61025 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1bP61025 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.1□□□□□ -0.15
Cks1bP61025 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1bP61025 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cks1bP61025 Gm9806-201ENSMUST00000051080 552 ntBASIC14.09□□□□□ -0.15
Cks1bP61025 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cks1bP61025 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms