Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
Atxn1P54254 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.86■□□□□ 0.77
Atxn1P54254 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Atxn1P54254 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Atxn1P54254 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.86■□□□□ 0.77
Atxn1P54254 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 Gm12933-201ENSMUST00000120203 872 ntBASIC19.85■□□□□ 0.77
Atxn1P54254 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Atxn1P54254 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.85■□□□□ 0.77
Atxn1P54254 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.85■□□□□ 0.77
Atxn1P54254 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Atxn1P54254 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atxn1P54254 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atxn1P54254 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atxn1P54254 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.84■□□□□ 0.77
Atxn1P54254 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atxn1P54254 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Atxn1P54254 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Atxn1P54254 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Atxn1P54254 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atxn1P54254 Smad6-203ENSMUST00000179458 273 ntBASIC19.83■□□□□ 0.77
Atxn1P54254 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.83■□□□□ 0.77
Atxn1P54254 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.83■□□□□ 0.77
Atxn1P54254 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atxn1P54254 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Atxn1P54254 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atxn1P54254 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Atxn1P54254 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.82■□□□□ 0.76
Atxn1P54254 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.82■□□□□ 0.76
Atxn1P54254 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.82■□□□□ 0.76
Atxn1P54254 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
Atxn1P54254 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.82■□□□□ 0.76
Atxn1P54254 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atxn1P54254 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Atxn1P54254 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.81■□□□□ 0.76
Atxn1P54254 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atxn1P54254 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.8■□□□□ 0.76
Atxn1P54254 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Atxn1P54254 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atxn1P54254 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Atxn1P54254 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.79■□□□□ 0.76
Atxn1P54254 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atxn1P54254 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Atxn1P54254 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.78■□□□□ 0.76
Atxn1P54254 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Gm10252-201ENSMUST00000209541 832 ntBASIC19.78■□□□□ 0.76
Atxn1P54254 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.78■□□□□ 0.76
Atxn1P54254 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.78■□□□□ 0.76
Atxn1P54254 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Atxn1P54254 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atxn1P54254 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.77■□□□□ 0.76
Atxn1P54254 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atxn1P54254 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.77■□□□□ 0.76
Atxn1P54254 Gm10653-202ENSMUST00000139570 835 ntBASIC19.77■□□□□ 0.76
Atxn1P54254 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.77■□□□□ 0.76
Atxn1P54254 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atxn1P54254 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.77■□□□□ 0.76
Atxn1P54254 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms