Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CLTCL1P53675 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
CLTCL1P53675 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC32.54■■■□□ 2.8
CLTCL1P53675 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CLTCL1P53675 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC32.54■■■□□ 2.8
CLTCL1P53675 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.53■■■□□ 2.8
CLTCL1P53675 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
CLTCL1P53675 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CLTCL1P53675 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CLTCL1P53675 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.52■■■□□ 2.8
CLTCL1P53675 IKBKGP1-201ENST00000612193 1073 ntBASIC32.52■■■□□ 2.8
CLTCL1P53675 RAB43-208ENST00000615093 783 ntTSL 5 BASIC32.52■■■□□ 2.8
CLTCL1P53675 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
CLTCL1P53675 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CLTCL1P53675 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC32.52■■■□□ 2.8
CLTCL1P53675 MIR6084-201ENST00000622012 110 ntBASIC32.51■■■□□ 2.8
CLTCL1P53675 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
CLTCL1P53675 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CLTCL1P53675 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC32.51■■■□□ 2.8
CLTCL1P53675 MIR572-201ENST00000384983 95 ntBASIC32.51■■■□□ 2.79
CLTCL1P53675 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CLTCL1P53675 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
CLTCL1P53675 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC32.5■■■□□ 2.79
CLTCL1P53675 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC32.5■■■□□ 2.79
CLTCL1P53675 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.5■■■□□ 2.79
CLTCL1P53675 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
CLTCL1P53675 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CLTCL1P53675 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC32.5■■■□□ 2.79
CLTCL1P53675 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
CLTCL1P53675 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
CLTCL1P53675 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC32.49■■■□□ 2.79
CLTCL1P53675 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.49■■■□□ 2.79
CLTCL1P53675 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CLTCL1P53675 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC32.49■■■□□ 2.79
CLTCL1P53675 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.48■■■□□ 2.79
CLTCL1P53675 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
CLTCL1P53675 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
CLTCL1P53675 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC32.48■■■□□ 2.79
CLTCL1P53675 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.48■■■□□ 2.79
CLTCL1P53675 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC32.48■■■□□ 2.79
CLTCL1P53675 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CLTCL1P53675 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CLTCL1P53675 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.47■■■□□ 2.79
CLTCL1P53675 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.47■■■□□ 2.79
CLTCL1P53675 DUX4L4-201ENST00000566884 1269 ntBASIC32.47■■■□□ 2.79
CLTCL1P53675 AC092437.1-201ENST00000624794 1048 ntBASIC32.47■■■□□ 2.79
CLTCL1P53675 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CLTCL1P53675 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.46■■■□□ 2.79
CLTCL1P53675 AC144652.1-201ENST00000609974 1624 ntBASIC32.46■■■□□ 2.79
CLTCL1P53675 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.46■■■□□ 2.79
CLTCL1P53675 AL358852.1-201ENST00000623174 1268 ntBASIC32.46■■■□□ 2.79
CLTCL1P53675 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC32.46■■■□□ 2.79
CLTCL1P53675 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC32.46■■■□□ 2.79
CLTCL1P53675 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
CLTCL1P53675 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLTCL1P53675 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC32.45■■■□□ 2.79
CLTCL1P53675 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
CLTCL1P53675 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CLTCL1P53675 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC32.45■■■□□ 2.79
CLTCL1P53675 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.45■■■□□ 2.79
CLTCL1P53675 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CLTCL1P53675 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CLTCL1P53675 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC32.44■■■□□ 2.78
CLTCL1P53675 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.44■■■□□ 2.78
CLTCL1P53675 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC32.44■■■□□ 2.78
CLTCL1P53675 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CLTCL1P53675 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.44■■■□□ 2.78
CLTCL1P53675 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC32.44■■■□□ 2.78
CLTCL1P53675 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.43■■■□□ 2.78
CLTCL1P53675 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CLTCL1P53675 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.43■■■□□ 2.78
CLTCL1P53675 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
CLTCL1P53675 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
CLTCL1P53675 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms