Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcd4O89016 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcd4O89016 Gm6139-201ENSMUST00000079261 882 ntBASIC18.02■□□□□ 0.48
Abcd4O89016 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcd4O89016 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Abcd4O89016 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Abcd4O89016 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcd4O89016 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Abcd4O89016 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcd4O89016 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.01■□□□□ 0.47
Abcd4O89016 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Abcd4O89016 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
Abcd4O89016 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18■□□□□ 0.47
Abcd4O89016 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18■□□□□ 0.47
Abcd4O89016 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcd4O89016 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.99■□□□□ 0.47
Abcd4O89016 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Abcd4O89016 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Abcd4O89016 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Gm43530-201ENSMUST00000195920 274 ntBASIC17.99■□□□□ 0.47
Abcd4O89016 Gm8493-201ENSMUST00000196881 489 ntBASIC17.99■□□□□ 0.47
Abcd4O89016 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcd4O89016 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Abcd4O89016 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Abcd4O89016 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.98■□□□□ 0.47
Abcd4O89016 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Abcd4O89016 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abcd4O89016 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcd4O89016 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcd4O89016 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcd4O89016 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.98■□□□□ 0.47
Abcd4O89016 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abcd4O89016 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Abcd4O89016 Gm43017-201ENSMUST00000198296 752 ntBASIC17.97■□□□□ 0.47
Abcd4O89016 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcd4O89016 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.97■□□□□ 0.47
Abcd4O89016 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.97■□□□□ 0.47
Abcd4O89016 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcd4O89016 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.96■□□□□ 0.47
Abcd4O89016 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Abcd4O89016 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.96■□□□□ 0.47
Abcd4O89016 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Abcd4O89016 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Abcd4O89016 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Abcd4O89016 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Abcd4O89016 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcd4O89016 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Abcd4O89016 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Abcd4O89016 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Abcd4O89016 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.95■□□□□ 0.46
Abcd4O89016 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
Abcd4O89016 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcd4O89016 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Abcd4O89016 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Abcd4O89016 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.94■□□□□ 0.46
Abcd4O89016 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcd4O89016 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Abcd4O89016 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms