Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.75■□□□□ 0.91
Ebf3O08791 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf3O08791 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.75■□□□□ 0.91
Ebf3O08791 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf3O08791 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.74■□□□□ 0.91
Ebf3O08791 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf3O08791 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf3O08791 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.74■□□□□ 0.91
Ebf3O08791 Gm43060-201ENSMUST00000200621 289 ntBASIC20.74■□□□□ 0.91
Ebf3O08791 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf3O08791 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf3O08791 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf3O08791 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf3O08791 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ebf3O08791 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ebf3O08791 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.72■□□□□ 0.91
Ebf3O08791 Iqck-206ENSMUST00000208658 2891 ntBASIC20.72■□□□□ 0.91
Ebf3O08791 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf3O08791 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ebf3O08791 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ebf3O08791 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ebf3O08791 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf3O08791 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Ebf3O08791 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ebf3O08791 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ebf3O08791 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ebf3O08791 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Gm40848-201ENSMUST00000221998 324 ntBASIC20.7■□□□□ 0.9
Ebf3O08791 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ebf3O08791 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf3O08791 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.69■□□□□ 0.9
Ebf3O08791 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Ebf3O08791 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ebf3O08791 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf3O08791 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.68■□□□□ 0.9
Ebf3O08791 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Ebf3O08791 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.68■□□□□ 0.9
Ebf3O08791 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.68■□□□□ 0.9
Ebf3O08791 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf3O08791 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf3O08791 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf3O08791 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Ebf3O08791 Gm10493-201ENSMUST00000097270 612 ntBASIC20.66■□□□□ 0.9
Ebf3O08791 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ebf3O08791 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ebf3O08791 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ebf3O08791 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms